Insertion junction: CLIP2.054654_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054654
Chromosome:chromosome 13
Location:3557893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587800 NUP188 (1 of 1) PTHR31431:SF1 - NUCLEOPORIN NUP188 HOMOLOG; Nucleoporin 188 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAAGTCCGCTGGAGCCTACCCACGGCATCACCGCTTCCCCCACTTCG
Internal bar code:ATCTAAGATGCTTCCGGGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1364
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACCAACTACCAACCGCC
Suggested primer 2:GCCTCGTTGTGTTAGGACCA