Insertion junction: CLIP2.054659_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054659
Chromosome:chromosome 10
Location:3076007
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441200 LAL3 La-domain RNA-binding protein; (1 of 1) K18757 - la-related protein 1 (LARP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACAGCTCTATTCCGATGGATTTGCAAGCCCACAGAACAGCTGTGGCTC
Internal bar code:AGTCATCGGCCAGCCAGTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3933
LEAP-Seq percent confirming:83.1579
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCAAATCGCCAACGTTG
Suggested primer 2:AATGTAGGGGCCCATGTTGG