Insertion junction: CLIP2.054666_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054666
Chromosome:chromosome 13
Location:3181378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585100 (1 of 2) IPR002014//IPR008942 - VHS domain // ENTH/VHS CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAATCGAGACCCGCGCGCAACGCATGTTGCCGCAGCAGAGCCCATGTT
Internal bar code:CTTTGGGATGAGAACGGAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2958
LEAP-Seq percent confirming:88.0952
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TATGAAAGGCCCTGTGCTGG
Suggested primer 2:CGGGATTGGGGTTTCAAGGA