Insertion junction: CLIP2.054667_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054667
Chromosome:chromosome 4
Location:3936903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g231124 (1 of 1) PF00397//PF00642 - WW domain (WW) // Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGGCATGCGGTCGGTGGGTTGCACGGGCAGGGTTTGCGCGGGCAGTTT
Internal bar code:TAGACCGACGATCACCCAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:49
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGTATTGCTTGGGATGC
Suggested primer 2:TTGATATGGGTGCCGCAACT