Insertion junction: CLIP2.054668_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054668
Chromosome:chromosome 4
Location:3289757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g226850 ASP1 (1 of 1) 3.4.23.5 - Cathepsin D; Pepsin-type aspartyl protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGGACGTCCAAAACACTCACCCACCCGCCCATCTATGCACACGCGCA
Internal bar code:CTGCTCCTTTTTAATTTGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:285
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGTCATTCGCATGCTGT
Suggested primer 2:ACACGTTGAAACCATGCAGC