Insertion junction: CLIP2.054668_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054668
Chromosome:chromosome 4
Location:3289762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g226850 ASP1 (1 of 1) 3.4.23.5 - Cathepsin D; Pepsin-type aspartyl protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAAGTCGGAAGCGAAGGGTTTCGGCAGTGTTATCAGGTCTCGGGTGCG
Internal bar code:CTGCTCCTTTTTAATTTGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:699
LEAP-Seq percent confirming:47.1698
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGTTGAAACCATGCAGC
Suggested primer 2:TCCTGTCATTCGCATGCTGT