Insertion junction: CLIP2.054671_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054671
Chromosome:chromosome 9
Location:2505298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392950 TMG12 tRNA (guanosine-2'-O)-methyltransferase; (1 of 1) PTHR12029//PTHR12029:SF55 - RNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGTAGCGGCCCGCACGCACCACTCCAGCCGCAGCGCGCGCTTGCGC
Internal bar code:ATTTTCCTGTTTACCAATCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1805
LEAP-Seq percent confirming:86.8421
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGACAGAGGGAGGGATAGCT
Suggested primer 2:CCTTAGCTCTGCAACCCCAA