Insertion junction: CLIP2.054675_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054675
Chromosome:chromosome 9
Location:1536984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399300 FKB17A,FKB17-1,FKB14 Peptidyl-prolyl cis-trans isomerase, FKBP-type; (1 of 2) PTHR10516//PTHR10516:SF308 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAACCCTCTCTTTCCTGGCACGCCACGCCAACGCCGCTTGCTGCCTGT
Internal bar code:ATGAGAAGATTGGGTATGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3097
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCCATAACCGACTACCG
Suggested primer 2:CGTGGGTGTTGTGTACGGTA