Insertion junction: CLIP2.054677_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054677
Chromosome:chromosome 10
Location:3826454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g445850 MAE14 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGACGCTGCCACCGGTCGTGCAGGAGCTGGCCCCGCCGCCGCCACCAA
Internal bar code:AGCGTGAGCACCCGTGGCGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1774
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACACAACAGCCGTCATG
Suggested primer 2:CCAGACAAACAACTGCCAGC