Insertion junction: CLIP2.054680_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054680
Chromosome:chromosome 7
Location:2274807
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327750 TRP3 Transient receptor potential ion channel protein; (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAATGGTTCCTTCTATGTATAGTCCGGAGACACGGTCCCTACACTGT
Internal bar code:AATGGCCTGGTATAATTTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:638
LEAP-Seq percent confirming:60.3774
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGGTCGACTCTGCTTC
Suggested primer 2:CTCTGGATCCGGATTCTGGC