Insertion junction: CLIP2.054680_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054680
Chromosome:chromosome 7
Location:2274808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327750 TRP3 Transient receptor potential ion channel protein; (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAATGCCTTCCCTTCTACAGTCCCCGCGCCATGTCAGTCCCCGCCCCT
Internal bar code:GGCCTGAGTGATGGACCCGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:168
LEAP-Seq percent confirming:16.3934
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGGATCCGGATTCTGGC
Suggested primer 2:TGTGTGGTCGACTCTGCTTC