Insertion junction: CLIP2.054697_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054697
Chromosome:chromosome 16
Location:2766674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662250 (1 of 1) PF15901 - Sortilin, neurotensin receptor 3, C-terminal (Sortilin_C) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAGGGAGGGGGGTACATTCATGATTATTCAAGAAGTGAAGGCGTAGG
Internal bar code:ATTGCGGTGCTCATATTGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:392
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAACCGTTCGCATGTATGGC
Suggested primer 2:TAGACACTGGGGTGGGTAGG