Insertion junction: CLIP2.054703_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054703
Chromosome:chromosome 3
Location:6480692
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193600 (1 of 4) 2.7.11.13 - Protein kinase C / PKC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGATGGTATGGGGTGAAGAAGAAGACTCACACCTTGCTCCCAATGTTG
Internal bar code:GTAGTCGACAAGGAAGTTCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1270
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAGGGAAAGCATTGGGGC
Suggested primer 2:GGGTTCATTGCTGCCTAGGT