Insertion junction: CLIP2.054707_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054707
Chromosome:chromosome 9
Location:4623536
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401701 (1 of 1) IPR001104//IPR010721 - 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal // Protein of unknown function DUF1295 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCTATTTGCCGCGCGGTGCAAACCTACCGACCCTCGCACCTTATGAG
Internal bar code:ACATAAATAGCCTGGCCAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:102
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGGACAAGGGAAGGGGG
Suggested primer 2:GATCGCGAACCGGTTTCATG