Insertion junction: CLIP2.054707_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054707
Chromosome:chromosome 9
Location:4623538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401701 (1 of 1) IPR001104//IPR010721 - 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal // Protein of unknown function DUF1295 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGCTAGGATGACAAAGGCAGCCCTATTCCCAGTTACGACCCGAAAT
Internal bar code:AAGGCGTATGACTCCGTGCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1846
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GATCGCGAACCGGTTTCATG
Suggested primer 2:GAAAGGACAAGGGAAGGGGG