Insertion junction: CLIP2.054727_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054727
Chromosome:chromosome 12
Location:8688245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g547800 SNE15 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; NAD dependent epimerase/dehydratase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCCTTGCAGGACGTACACTTCCGGGAACTAGAACTACTCCCATACCG
Internal bar code:TAAGTCTGCATTGCTGGAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4001
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCACGAGTCCAAGTGTC
Suggested primer 2:AGTACTGGAGTGCTGGCAAC