Insertion junction: CLIP2.054730_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054730
Chromosome:chromosome 13
Location:4027737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590600 PDE32 (1 of 1) IPR000104//IPR002073//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // 3'5'-cyclic nucleotide phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCAACGCGCCGCCGCCACTATACCCGCAGCAAACCGCTGACGCCGCC
Internal bar code:AAAAAGCACGTTTGTCTCTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1861
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTTCCAGAGACAACCGC
Suggested primer 2:TGCTTGTCAAATGCCAACCG