Insertion junction: CLIP2.054733_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.054733
Chromosome:chromosome 12
Location:5521504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530400 CrZIP13,IRT1,ZIP11 Iron-nutrition responsive ZIP family Fe transporter; (1 of 5) K07238 - zinc transporter, ZIP family (TC.ZIP, zupT, ZRT3, ZIP2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGACCCGGTTACACCCAGGGCCGAGTTGGCCCGCCCATCTCGTCGGTG
Internal bar code:TGGTTACCGTACCTCCGCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1490
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGAATCGGCAAGCAAGGATG
Suggested primer 2:GGCAAAGAACAGTGGGCAAG