Insertion junction: CLIP2.054736_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054736
Chromosome:chromosome 16
Location:1030525
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649150 (1 of 1) PF13414//PF13920 - TPR repeat (TPR_11) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCAATGCTGGCCAACAGCCTTGCGGACTGGATGGATAGTCATGGCA
Internal bar code:AATGTGACTACAACGTTGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2046
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACACAGTGCAAAGGTCA
Suggested primer 2:AAAGATGGAAGTGCCGACGT