Insertion junction: CLIP2.054739_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054739
Chromosome:chromosome 7
Location:2313012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327950 MAW9 Membrane-associated hydroxyproline-rich glycoprotein 9 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCCCTGAGCCTCCCTCCCCTGAGCCACCCAGCCCGGAGCCTCCCAGC
Internal bar code:CTGCAGTAGCAGTGCCACTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:11.4286
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:62
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAAGCATGCAACCCGTT
Suggested primer 2:CCTCACTTTCGACCCATGCT