Insertion junction: CLIP2.054746_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054746
Chromosome:chromosome 7
Location:5027327
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347550 (1 of 1) PTHR23389:SF6 - ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCCACGGCTGCCCCCTCGCCCGACCCCGCATCGCCAGGTGCCTCGCC
Internal bar code:TTCTTGTAAAAGCATTTAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1768
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAGCGTTGTTGCTGCCAA
Suggested primer 2:CTGTTCCTGACCCTGCTCAG