Insertion junction: CLIP2.054764_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054764
Chromosome:chromosome 3
Location:3962965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171250 (1 of 1) IPR000104//IPR011989//IPR012677//IPR013083 - Antifreeze protein, type I // Armadillo-like helical // Nucleotide-binding alpha-beta plait domain // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTTAGGGTGCAAGAAGGGAGGGGCCATGTTGCTGAAGCTTGCACAACC
Internal bar code:GTCATGTGTACAATCTCTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:939
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAACCCCAACCCACATT
Suggested primer 2:TAGCCTCTTCCTCCACCTCC