Insertion junction: CLIP2.054767_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054767
Chromosome:chromosome 3
Location:6443704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193250 (1 of 1) 2.7.1.160 - 2'-phosphotransferase / Yeast 2'-phosphotransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAAACCCTTGCCGGGCACCCCGCTTCCTCACACTACGCAGAAGCGGTT
Internal bar code:TAGATGTCGTTAGGTCATATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1871
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCGGCCCACTTGTTAT
Suggested primer 2:CGCAATTGGTAGAACGCTCG