Insertion junction: CLIP2.054771_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054771
Chromosome:chromosome 11
Location:3066722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g474850 PUS17 (1 of 2) 5.4.99.29 - 23S rRNA pseudouridine(746) synthase / 23S RNA Psi(746) synthase; RNA pseudouridine synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGAGCAGCTGGACCGCATCCACGCCGTGCGGGCGGAGGGGCTGGCGC
Internal bar code:GATGTGTGTGCGGATGCGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:5198
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGCTCACAACCACATGG
Suggested primer 2:CAACACTCGACCAACGGAGA