Insertion junction: CLIP2.054781_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054781
Chromosome:chromosome 9
Location:2093790
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g396200 CSV4 Chlamydomonas-specific family protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATAATGAGGCGAGTTCGAACCTCAGGCTACCCCTAGCCCACTTGTTAT
Internal bar code:TACCTCGAGCGAGCCGAGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:583
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCCAGAACCAGTGGCAC
Suggested primer 2:GTCGATTGTGTGCTCGCATC