Insertion junction: CLIP2.054794_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.054794
Chromosome:chromosome 1
Location:3314462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021400 SPL13 Pre-mRNA splicing factor; (1 of 1) PTHR16196//PTHR16196:SF0 - CELL CYCLE CONTROL PROTEIN CWF25 // PRE-MRNA-SPLICING FACTOR CWC25 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCAGGCTGAGCAGCTGGCGAACCTGCCGTCCTTCTACGCCCAGGCCA
Internal bar code:GGGGCGCTTTCTTGTCCGAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3195
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCCTCCTTCTCCTTGG
Suggested primer 2:CGCCAACCAGAGTCAAGACT