Insertion junction: CLIP2.054797_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054797
Chromosome:chromosome 4
Location:2622039
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g222950 SUR2 (1 of 1) PTHR34348:SF1 - SURFEIT LOCUS PROTEIN 2; Surfeit 2-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATGCGAGGCTACACAGGTACTTCGGCGGGGCTATACAGGTACTCCGG
Internal bar code:CTAATAAAGTTAGTCCGTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1927
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACGTGTGTGTGCCTTTG
Suggested primer 2:CTCTCAATCACCCACCACCC