Insertion junction: CLIP2.054805_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054805
Chromosome:chromosome 13
Location:1940960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576150 APN1 (1 of 1) PTHR11707//PTHR11707:SF3 - L-ASPARAGINASE // SUBFAMILY NOT NAMED; L-asparaginase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCCCGAGCGCGTCCAGCGAGTTCTGGGCTTCGCCCTTACCAGACGAG
Internal bar code:AATGACTTGTCATTTGGACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2430
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGGTATGGGTGTGCAA
Suggested primer 2:ATCTCTGCCACTGCCATTCC