Insertion junction: CLIP2.054813_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054813
Chromosome:chromosome 5
Location:327321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243452 (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTAGCGGAGGAGGTAAAGGCCAGCGATACTACTCCATCCAAGCAAAAC
Internal bar code:ATCTTTGTAGGAGTTACAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1080
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGTGTGAACGACAGCCA
Suggested primer 2:CTGTGCAATGTTAGCGACGG