Insertion junction: CLIP2.054823_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054823
Chromosome:chromosome 10
Location:1760452
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g430501 (1 of 1) PTHR22904//PTHR22904:SF331 - TPR REPEAT CONTAINING PROTEIN // CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN 3'UTR
Cre10.g801118 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGATGCGGCACAGTGCTCAAGCACGTGCGCTAACCGGGGTGAGGCGG
Internal bar code:GGATTCTAAGTTTGTGGTAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1846
LEAP-Seq percent confirming:98.7952
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATTTAGGGGCCACTTGC
Suggested primer 2:CGTATCCTTCCGTCATGCGA