Insertion junction: CLIP2.054825_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054825
Chromosome:chromosome 13
Location:2784938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801538 (1 of 73) IPR000477//IPR005135 - Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCGCGTGGCGTACTTGTAGCACTCTGCAGGTACGCGGTCTAGCCCGC
Internal bar code:CTTAGCACTTGTCTCGCCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4243
LEAP-Seq percent confirming:24.1379
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAGTGCTATACCGTGCG
Suggested primer 2:GTCCGTCAACTACTGGGCAA