Insertion junction: CLIP2.054828_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054828
Chromosome:chromosome 3
Location:265267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144364 (1 of 4) IPR000225//IPR011989//IPR016024 - Armadillo // Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGAACGCACCTGCAAGCCGCTGACTTAAGCAGTTGCGTCTCCACGAC
Internal bar code:GGGTAGATTATGCTCACACTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3389
LEAP-Seq percent confirming:87.1795
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGGAGCAGCTTCTAGGG
Suggested primer 2:GGGCATCGTGCTTGCATAAG