Insertion junction: CLIP2.054828_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054828
Chromosome:chromosome 3
Location:265268
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144364 (1 of 4) IPR000225//IPR011989//IPR016024 - Armadillo // Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCGGGAGCTCGGCGCGGGAGACAGGCGGTCGTGCGGGCCGTTCCCGC
Internal bar code:GCCAGGCGGTCCATCGTATCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3104
LEAP-Seq percent confirming:42.1053
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCATCGTGCTTGCATAAG
Suggested primer 2:CGATGGAGCAGCTTCTAGGG