Insertion junction: CLIP2.054830_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054830
Chromosome:chromosome 6
Location:8476376
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308900 SAM50,TOB55 Sorting assembly machinery 50 kDa subunit; (1 of 2) K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACACCAGCACTGCACCGCCCCCACACTGCCCGTTGTACCCTGCCAGCC
Internal bar code:AATCATATCGATTAGATGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:443
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTCGTCCTCCTACACGGA
Suggested primer 2:CTGACTCACCAACCCTGACC