Insertion junction: CLIP2.054830_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054830
Chromosome:chromosome 6
Location:8476382
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308900 SAM50,TOB55 Sorting assembly machinery 50 kDa subunit; (1 of 2) K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTCGTTCCGCTGTCACTGCTCTATCTGCCCCCTCAGCTCCGGCCCCC
Internal bar code:AATCATATCGATTAGATGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:123
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACTCACCAACCCTGACC
Suggested primer 2:AAGTCGTCCTCCTACACGGA