Insertion junction: CLIP2.054833_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054833
Chromosome:chromosome 1
Location:5223570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036550 ERV14 (1 of 1) PTHR12290:SF11 - PROTEIN CORNICHON; Cornichon-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAGGCGGCTCGGGGCGGCCTGAGCGCTCGGCGTGCTGCAGTGCGGAAG
Internal bar code:GGCCGTGGGAGGCTTCGGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2382
LEAP-Seq percent confirming:76.7857
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCAATCCATGTCTGGCAG
Suggested primer 2:GTGAAGGAGGAGGCAAACGA