Insertion junction: CLIP2.054838_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054838
Chromosome:chromosome 12
Location:4018468
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516050 (1 of 1) PF00498//PF13920 - FHA domain (FHA) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAATGTGCGCGACACGAAGAGACGTTGTAGTCGCTAGCACGCATAGAA
Internal bar code:AGTGGTGATAAAGTATTCCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2359
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTTGTGCAGTTGACTG
Suggested primer 2:TGGCACAAAAGCAATCCTGC