Insertion junction: CLIP2.054848_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054848
Chromosome:chromosome 2
Location:7875286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145850 FAP112 Flagellar Associated Protein 112; (1 of 3) IPR006130 - Aspartate/ornithine carbamoyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGATCGGACATTAGCTGTGCACACCCCGTCCAGCGTAACCAGCGTGA
Internal bar code:CAGGTCTACATTGGGCGGCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2167
LEAP-Seq percent confirming:62.8571
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCACTGCGGAAATATGT
Suggested primer 2:CCCCGACTCACTCGATCATG