Insertion junction: CLIP2.054851_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054851
Chromosome:chromosome 10
Location:3427789
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444150 (1 of 2) IPR007743//IPR027417//IPR030385 - Immunity-related GTPases-like // P-loop containing nucleoside triphosphate hydrolase // IRG-type guanine nucleotide-binding (G) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAGTGCGTGCGAGGGCACGTGGTATGAGACGAAGCTGCCAATGTGAG
Internal bar code:GCGGTCAGTCACATACGTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:286
LEAP-Seq percent confirming:2.38095
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGACTGGAGGACCCATA
Suggested primer 2:AGTTCGTCCCATTCACGGAC