Insertion junction: CLIP2.054856_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054856
Chromosome:chromosome 3
Location:5040468
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179941 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTTCAGTTTGGGCTGGTATCTACACCCCCCCCCAACACACAGACACAC
Internal bar code:GGAAGCACCGACACGGGTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1179
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGAAAGCACAAACTGGG
Suggested primer 2:CCAGCTTCTGTTTGTTGGGC