Insertion junction: CLIP2.054860_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054860
Chromosome:chromosome 14
Location:3737796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g631600 (1 of 1) 1.5.1.40 - 8-hydroxy-5-deazaflavin:NADPH oxidoreductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACACAAGGGCAAGCGAAGTGTGGCGGGGGGCCGAGGGGTTGGGACAA
Internal bar code:TGTGTGGAAGAGGCGATCTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1917
LEAP-Seq percent confirming:61.9048
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATCTGTGTGCACAAACA
Suggested primer 2:TACGCAATGCTACGGCTAGG