Insertion junction: CLIP2.054861_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054861
Chromosome:chromosome 2
Location:6887191
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388726 (1 of 1) 3.1.3.32 - Polynucleotide 3'-phosphatase / 2'(3')-polynucleotidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATCCATCCCCACCGGTGGGGTGTGAGAACCGTGTGCTACAGCTAGTA
Internal bar code:CTGAAAGGCGGGATAGTGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3764
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAAACAAGTGAGCCAGG
Suggested primer 2:GAACTATGTTCGACGCGTGC