Insertion junction: CLIP2.054870_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.054870
Chromosome:mitogenome
Location:6107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreMt.g802340 cox1,ChrepMp04,801495 (1 of 1) K02256 - cytochrome c oxidase subunit 1 (COX1); cytochrome oxidase subunit 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTGACATGCTTGTACACGATACCTACTACGTAGTAGCTCACTTCCAC
Internal bar code:GGGTGGTGGTGCGTACTCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:839
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAAGACACATGGCCGTTG
Suggested primer 2:AAGCGTACAACACAGCGGTA