Insertion junction: CLIP2.054875_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054875
Chromosome:chromosome 7
Location:3394542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335200 GBA1,EFG12 (1 of 1) PTHR23115//PTHR23115:SF165 - TRANSLATION FACTOR // TYPA-LIKE TRANSLATION ELONGATION FACTOR SVR3-RELATED; Putative chloroplast TypA translation elongation GTPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACTTGGTCATGGCCCAAATGCTTTACATATGTCACATGCATATTGCTT
Internal bar code:TATCCCTAGTTCGCAGCGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4125
LEAP-Seq percent confirming:91.8367
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTTGCTTGAACGGCCAG
Suggested primer 2:GGAAAACTGGCCAAGCACAG