Insertion junction: CLIP2.054877_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054877
Chromosome:chromosome 17
Location:3656287
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725550 GLD1 Glucose-6-phosphate-1-dehydrogenase; (1 of 2) 1.1.1.49 - Glucose-6-phosphate dehydrogenase (NADP(+)) / GPD intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAGTCGGCGTGTGTGTGTTGGTAGGGGAGCGGGTGGTGGCAGACAGGT
Internal bar code:TGTTGGATGGTGGAATTCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:223
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCCATCGACCTAATCCG
Suggested primer 2:GGCTACTTCGACTCGTACGG