Insertion junction: CLIP2.054878_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054878
Chromosome:chromosome 12
Location:6660723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801446 CDS
lncRNA_TCONS_00110460 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAAGGACGCACACAAACGCTCATTTATTACATTTGAAGATGGGCGTCC
Internal bar code:AATAGATTCGCGTATTATAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1776
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGGGCTGACATCACAGT
Suggested primer 2:AGACCCTGGCATTGTTCTGG