Insertion junction: CLIP2.054883_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054883
Chromosome:chromosome 10
Location:280166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419600 (1 of 2) PF07823 - Cyclic phosphodiesterase-like protein (CPDase) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCCACTGCTCTTTGGCGCGACTTGGCGAGCGCGGGCAAGCGCTGGCT
Internal bar code:GGTGACCCACGTCAGTGAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5810
LEAP-Seq percent confirming:89.2308
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGGACATCCTCTAGCCA
Suggested primer 2:AAGCACGTCAAGGTAGGTGG