Insertion junction: CLIP2.054883_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054883
Chromosome:chromosome 10
Location:280170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419600 (1 of 2) PF07823 - Cyclic phosphodiesterase-like protein (CPDase) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTACGCCCTGTCCCTCACAGACCAGGTGGCACCCACACCCGCCCCCCT
Internal bar code:CAGACCGGTAGGTAGAAAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5446
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCACGTCAAGGTAGGTGG
Suggested primer 2:AGCAGGACATCCTCTAGCCA