Insertion junction: CLIP2.054884_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054884
Chromosome:chromosome 16
Location:833418
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801884 (1 of 1) K19001 - ATP-dependent DNA helicase (HELLS, DDM1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCCTCCCCGCTTGGTTCAATTTGAGCTGGCATGCAAACCTCTCCCCT
Internal bar code:GTTTGTTACAGATGGGATTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1499
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAAACAACAACACGCCGC
Suggested primer 2:GGAGATCAGCGAGGACGAAG