Insertion junction: CLIP2.054896_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054896
Chromosome:chromosome 11
Location:1830915
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467500 (1 of 1) PF05664 - Plant family of unknown function (DUF810) (DUF810) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGAACACACAAACACCCCACCCACCCCCGCACACACACACGCGCCGA
Internal bar code:CTTATCCGGGTCCTAGGCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1956
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTGTGTGTGTAAGCAAA
Suggested primer 2:GGGCTGGGGTGATTCTTTCA